Molecular Dynamic Simulation on Gromacs Software udemy video course for MD simulation download, we have designed the course to provide a brief introduction of Molecular Dynamics Simulation and why different parameter exists in its simulation. An introduction to the software is provided with an explanation as to why we have selected this software in particular. Furthermore, how to install, operate and understand the different parameters of software is also involved. For the study of biomolecules molecular dynamics simulations have become a common technique. Molecular dynamics the science of simulating the motions of a system of particles applied to biological macromolecules gives the fluctuations in the relative positions of the atoms in aprotein or in DNA as a function of time.
What you’ll learn
- Understand what Molecular Dynamics Simulation in Drug Discovery
- How thermodynamics is involved
- Parameters of Thermodynamics involved in Molecular Dynamics Simulation
- GROMACS Software: Installation, Parameters involved and Execution
Course content
- Introduction of Molecular Dynamics Simulation
- Introduction of Molecular Dynamics Simulation Software Gromacs
- Commands on Gromacs
- How to Commands on Gromacs for Molecular Dynamics Simulation
- Step of Solvation & ionization for molecular dynamics simulation
- Energy Minimization
- Energy Minimization Step in Molecular Dynamics Simulation
- Equilibration and MD Simulation
- Final Step of MD Simulation
- Analysis Molecular Dynamics Simulation
Who this course is for:
- Enthusiasts that are interested in Molecular Dynamics Simulation, Bachelors, master’s and PhD Students
Course details
- Video quality: MP4 | Video: h264, 1280 × 720
- Audio quality: Audio: AAC, 44.1 KHz, 2 Ch
- Video duration: 0h 39m
- Number of lessons: 3 sections, 8 lectures
- Language: English +srt
- Compressed file size: 260 MB